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Optionally report uncovered contigs in summary file #180

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dpryan79 opened this issue Aug 3, 2022 · 0 comments
Open

Optionally report uncovered contigs in summary file #180

dpryan79 opened this issue Aug 3, 2022 · 0 comments
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@brentp

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dpryan79 commented Aug 3, 2022

When processing large numbers of samples and storing the results for systematic comparisons it's handy to store results even for uncovered contigs. The .mosdeth.summary.txt file currently omits uncovered contigs. While we can easily program around that, it'd be super handy to (at least optionally) provide the entire set of contigs in this summary file regardless of their coverage status.
@brentp brentp self-assigned this Aug 3, 2022
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