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40 Open 177 Closed
40 Open 177 Closed
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Issues list

Mosdepth fails when run with less than 8GB RAM on ~50MB CRAM
#245 opened Dec 9, 2024 by dennishendriksen
1
Median is Only for Histogram
#242 opened Nov 20, 2024 by DarioS
v3.9.0 not available via quay.io
#240 opened Nov 14, 2024 by bartcharbon
1
Differences in WES Coverage Values (Mosdepth Versions 0.3.3 and 0.3.8)
#234 opened Jun 13, 2024 by niyati1211
2
: in region strings passed to --chrom
#230 opened Apr 22, 2024 by julibeg
addition of min and max counts to prefix.regions.bed.gz
#226 opened Apr 9, 2024 by joelarkman
[question]: mosdepth 0.3.7 via bioconda/docker
#225 opened Mar 21, 2024 by tamuanand
Warnings about invalid chromosome intervals .
#223 opened Feb 18, 2024 by Heather1999
1
Report all chromosomes/regions even though they have zero coverage
#222 opened Feb 12, 2024 by xsoleacha
2
Summary output with --use-median
#220 opened Jan 17, 2024 by Adamtaranto
[Question]: mosdepth 0.3.4 via Docker or Conda
#204 opened Jul 27, 2023 by tamuanand
2
misleading output in summary.txt file
#198 opened Mar 24, 2023 by nservant
3
.mosdepth.region.dist.txt missing values?
#190 opened Dec 6, 2022 by adamrtalbot
In summary.txt what's the difference between length and bases?
#188 opened Nov 21, 2022 by nuno5645
Percentage of Coverage for Exome Bed file
#186 opened Oct 13, 2022 by kiranpatil222
1
Coverage by region vs. Global dist
#184 opened Oct 10, 2022 by hlfreund
8
Optionally report uncovered contigs in summary file
#180 opened Aug 3, 2022 by dpryan79
@brentp
plot.dist.py output to screen only
#178 opened Jul 1, 2022 by space-beaver
4
threshold output to indicate how many bases in each region are covered at the given thresholds.
#176 opened Apr 25, 2022 by asmlgkj
Support streaming from cloud storage buckets
#175 opened Apr 20, 2022 by SHuang-Broad
5
Exact sorting of the output bed file?
#173 opened Mar 30, 2022 by Dario-Galanti
2
Version 0.3.3 "zsh: exec format error: mosdepth" error on Mac
#171 opened Feb 26, 2022 by Calvinblue
2
Avg depth for multiple BAMs with BED input
#165 opened Dec 14, 2021 by Kiran936
1
Out of memory Issue
#161 opened Nov 26, 2021 by yangyxt
5
Coverage 0 for entire chr when using --by
#156 opened Sep 1, 2021 by elleira
7
ProTip! Exclude everything labeled bug with -label:bug.