DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.

Python and C++ code for reading and writing genomics data.

CoreNLP: A Java suite of core NLP tools for tokenization, sentence segmentation, NER, parsing, coreference, sentiment analysis, etc.